miRBase entry: tca-mir-276b

Stem-loop tca-mir-276b

Accession

MI0037445

Description

Tribolium castaneum tca-mir-276b precursor miRNA

Sequence

AGCACGGUAUGAAGUUCCUAcagccgaaaaaucacgUAGGAACUCUAUACCUCGCUagug
(((..((((((.(((((((((..............))))))))).))))))..)))....

Structure

----   AC      A         agccga 
    AGC  GGUAUG AGUUCCUAc      a
    |||  |||||| |||||||||       
    UCG  CCAUAU UCAAGGAUg      a
guga   CU      C         cacuaa

Annotation confidence Not enough data

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Genome context

ChLG3: 12023440-12023499 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tca-mir-276b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tca-miR-276b-5p

Accession	MIMAT0045604
Description	Tribolium castaneum tca-miR-276b-5p mature miRNA
Sequence	1 - AGCACGGUAUGAAGUUCCUA - 20
Evidence	experimental Illumina [1]

Mature tca-miR-276b-3p

Accession	MIMAT0045605
Description	Tribolium castaneum tca-miR-276b-3p mature miRNA
Sequence	37 - UAGGAACUCUAUACCUCGCU - 56
Evidence	experimental Illumina [1]

References

PubMed ID: 26518483
MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
"Ninova M, Ronshaugen M, Griffiths-Jones S"
"Genome Res (2016) 26:85-96