miRBase entry: tca-mir-11650

Stem-loop tca-mir-11650

Accession

MI0037463

Description

Tribolium castaneum tca-mir-11650 precursor miRNA

Sequence

cccgaaaacguccucgaaguaacggcacgcgccaucacuuacuaCCUGGACGUCUCGGCGGA
(((((..((((((..(.(((((.(((....))).....))))).)..)))))).)))).)..

Structure

-- -    aa      uc a     ----c   a 
  c ccga  acgucc  g aguaa     ggc c
  | ||||  ||||||  | |||||     |||  
  G GGCU  UGCAGG  C ucauu     ccg g
AG C    -C      UC a     cacua   c

Annotation confidence Not enough data

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Genome context

ChLG4: 10075035-10075096 [+]

Database links

Mature tca-miR-11650-3p

Accession	MIMAT0045628
Description	Tribolium castaneum tca-miR-11650-3p mature miRNA
Sequence	45 - CCUGGACGUCUCGGCGGA - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 26518483
MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
"Ninova M, Ronshaugen M, Griffiths-Jones S"
"Genome Res (2016) 26:85-96