miRBase entry: dqu-mir-279c

Stem-loop dqu-mir-279c


Accession
MI0037511
Description
Dinoponera quadriceps dqu-mir-279c precursor miRNA


Sequence

ggcggaucccuguuagcgguccugugggccgcugGACGGGUGUGCUCUAGUUUCAuguggcgcucgaucaUGACUAGAGUCACACUCGUCCAgcgaccgggacauccucguc
.(.(((((((.(((...(((((...)))))((((((((((((((((((((..(((((...........))))))))))).))))))))))))))))).))))..))).)...

Structure
--g c   --    u   agcgguccugugggcc              -      UU     uggc 
   g gga  uccc guu                gcugGACGGGUGUG CUCUAG  UCAug    g
   | |||  |||| |||                |||||||||||||| ||||||  |||||    c
   c ccu  aggg cag                cgACCUGCUCACAC GAGAUC  AGUac    u
cug u   ac    c   ----------------              U      --     uagc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature dqu-miR-279c-5p

Accession MIMAT0045721
Description Dinoponera quadriceps dqu-miR-279c-5p mature miRNA
Sequence 35 - GACGGGUGUGCUCUAGUUUCA - 55
Evidence experimental
Illumina [1]

Mature dqu-miR-279c-3p

Accession MIMAT0045722
Description Dinoponera quadriceps dqu-miR-279c-3p mature miRNA
Sequence 71 - UGACUAGAGUCACACUCGUCCA - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26483466
    Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
    "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
    "Proc Natl Acad Sci U S A (2015) 112:13970-13975