miRBase entry: dqu-mir-1175

Stem-loop dqu-mir-1175


Accession
MI0037535
Description
Dinoponera quadriceps dqu-mir-1175 precursor miRNA


Sequence

gcgccugaccgcgcggccaguggguaucacgguucAAGUGGAGAAGUGGUCUCUACGCUuuguaugaaagUGAGAUUCAACUCCUCCAACUUAUuccugauccccggu
((((......)))).(((.(.(((.((((.((...((((((((.(((.(..(((.((((((.....)))))))))..).))).)))).))))...)))))))))))))

Structure
gcgccugaccgcgcg   a u   u    c  uuc    -    A   G UC   A      g 
               gcc g ggg auca gg   AAGU GGAG AGU G  UCU CGCUuu u
               ||| | ||| |||| ||   |||| |||| ||| |  ||| |||||| a
               ugg c ccc uagu cc   UUCA CCUC UCA C  AGA GUgaaa u
---------------   - -   -    -  uUA    A    C   A UU   -      g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature dqu-miR-1175-5p

Accession MIMAT0045769
Description Dinoponera quadriceps dqu-miR-1175-5p mature miRNA
Sequence 36 - AAGUGGAGAAGUGGUCUCUACGCU - 59
Evidence experimental
Illumina [1]

Mature dqu-miR-1175-3p

Accession MIMAT0045770
Description Dinoponera quadriceps dqu-miR-1175-3p mature miRNA
Sequence 71 - UGAGAUUCAACUCCUCCAACUUAU - 94
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26483466
    Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
    "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
    "Proc Natl Acad Sci U S A (2015) 112:13970-13975