miRBase entry: pca-iab-4

Stem-loop pca-iab-4


Accession
MI0037568
Description
Polistes canadensis pca-iab-4 precursor miRNA


Sequence

gugaaacccccugcACGUAUACUGAAUGUAUCCUGAguguauuccugucCGGUAUACCUUCAGUAUACGUAACaggaggcuacac
(((...((.((((.((((((((((((.((((((.((..(.....)..)).)).)))).))))))))))))..)))).))...)))

Structure
   aaa  c    -c            U    -  U  gu u 
gug   cc ccug  ACGUAUACUGAA GUAU CC GA  g a
|||   || ||||  |||||||||||| |||| || ||  | u
cac   gg ggaC  UGCAUAUGACUU CAUA GG cu  c u
   auc  a    AA            C    U  C  gu c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pca-iab-4-5p

Accession MIMAT0045830
Description Polistes canadensis pca-iab-4-5p mature miRNA
Sequence 15 - ACGUAUACUGAAUGUAUCCUGA - 36
Evidence experimental
Illumina [1]

Mature pca-iab-4-3p

Accession MIMAT0045831
Description Polistes canadensis pca-iab-4-3p mature miRNA
Sequence 50 - CGGUAUACCUUCAGUAUACGUAAC - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26483466
    Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
    "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
    "Proc Natl Acad Sci U S A (2015) 112:13970-13975