miRBase entry: pca-mir-92c

Stem-loop pca-mir-92c


Accession
MI0037583
Description
Polistes canadensis pca-mir-92c precursor miRNA


Sequence

uaaaaaaauacguuaaaagaguaaucuuuggcAGGCUAGGAUGGGGGCAUGAUUUGuaugguuuaauucaAAUUGCACUCGUCCCGGCCUGCuaaauuuacucaauaucauc
..................((((((..(((((((((((.(((((((.(((..(((((.((......)).)))))))).))))))).))))))))))).)))))).........

Structure
uaaaaaaauacguuaaaa      uc           A       G   UG     u  gg 
                  gaguaa  uuuggcAGGCU GGAUGGG GCA  AUUUG au  u
                  ||||||  ||||||||||| ||||||| |||  ||||| ||   
                  cucauu  aaauCGUCCGG CCUGCUC CGU  UAAac ua  u
---------cuacuauaa      -u           C       A   --     u  au 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pca-miR-92c-5p

Accession MIMAT0045859
Description Polistes canadensis pca-miR-92c-5p mature miRNA
Sequence 33 - AGGCUAGGAUGGGGGCAUGAUUUG - 56
Evidence experimental
Illumina [1]

Mature pca-miR-92c-3p

Accession MIMAT0045860
Description Polistes canadensis pca-miR-92c-3p mature miRNA
Sequence 71 - AAUUGCACUCGUCCCGGCCUGC - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26483466
    Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
    "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
    "Proc Natl Acad Sci U S A (2015) 112:13970-13975