miRBase entry: pca-mir-210

Stem-loop pca-mir-210


Accession
MI0037590
Description
Polistes canadensis pca-mir-210 precursor miRNA


Sequence

acgcgaucaaggaacacuuauuggaccccaguguagCUGCUGGCCACUGCACAAGAUuagacauaagacuCUUGUGCGUGUGACAGCGGCUaugauggggcuuccacggaa
........(((.....)))..(((((((((..((((((((((..((((((((((((((........)).))))))))).))).))))))))))..)))))..)))).....

Structure
acgcgaucaaggaacacuuau    --     gu          GC   -         -  aga 
                     ugga  cccca  guagCUGCUG  CAC UGCACAAGA Uu   c
                     ||||  |||||  ||||||||||  ||| ||||||||| ||    
                     accu  ggggu  uaUCGGCGAC  GUG GCGUGUUCu ag   a
----------------aaggc    uc     ag          -A   U         c  aau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pca-miR-210-5p

Accession MIMAT0045873
Description Polistes canadensis pca-miR-210-5p mature miRNA
Sequence 37 - CUGCUGGCCACUGCACAAGAU - 57
Evidence experimental
Illumina [1]

Mature pca-miR-210-3p

Accession MIMAT0045874
Description Polistes canadensis pca-miR-210-3p mature miRNA
Sequence 71 - CUUGUGCGUGUGACAGCGGCU - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26483466
    Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
    "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
    "Proc Natl Acad Sci U S A (2015) 112:13970-13975