miRBase entry: pca-mir-263b

Stem-loop pca-mir-263b


Accession
MI0037593
Description
Polistes canadensis pca-mir-263b precursor miRNA


Sequence

cagugaggguucuggcggguCUUGGCACUGGAAGAAUUCACAGAugugcaauauauaAUCGUGGAUCUUGCAAUGCCaucacuugcuggaugccgauucaucauggauaucguc
..((((((((((((((((((..(((((.((.((((.(((((.(((............)))))))))))).)).)))))..)))))))))).)))..))))).............

Structure
-----------ca     --   -          CU     C  G    A     A   gugca 
             gugag  ggu ucuggcgggu  UGGCA UG AAGA UUCAC GAu     a
             |||||  ||| ||||||||||  ||||| || |||| ||||| |||      
             uacuu  ccg aggucguuca  aCCGU AC UUCU AGGUG CUA     u
cugcuauagguac     ag   u          cu     A  G    -     -   auaua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pca-miR-263b-5p

Accession MIMAT0045879
Description Polistes canadensis pca-miR-263b-5p mature miRNA
Sequence 21 - CUUGGCACUGGAAGAAUUCACAGA - 44
Evidence experimental
Illumina [1]

Mature pca-miR-263b-3p

Accession MIMAT0045880
Description Polistes canadensis pca-miR-263b-3p mature miRNA
Sequence 58 - AUCGUGGAUCUUGCAAUGCC - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26483466
    Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
    "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
    "Proc Natl Acad Sci U S A (2015) 112:13970-13975