miRBase entry: pca-mir-281

Stem-loop pca-mir-281


Accession
MI0037600
Description
Polistes canadensis pca-mir-281 precursor miRNA


Sequence

aaaacaaggcgcgaacuaugAAGAGAGCUAUCCAUCGACAGUaugguaaaaaaagacacUGUCAUGGAGUUGCUCUCUUUGuggacgccguccuauacaacgacgacuaacu
..........(((..(((((((((((((..(((((.((((((...((........)))))))))))))...))))))))))))).)))((((.........)))).......

Structure
--------------aaaacaaggc   aa             -UA     C      aug  aaa 
                        gcg  cuaugAAGAGAGC   UCCAU GACAGU   gu   a
                        |||  |||||||||||||   ||||| ||||||   ||    
                        cgc  gguGUUUCUCUCG   AGGUA CUGUca   ca   a
ucaaucagcagcaacauauccugc   -a             UUG     -      ---  gaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pca-miR-281-5p

Accession MIMAT0045893
Description Polistes canadensis pca-miR-281-5p mature miRNA
Sequence 21 - AAGAGAGCUAUCCAUCGACAGU - 42
Evidence experimental
Illumina [1]

Mature pca-miR-281-3p

Accession MIMAT0045894
Description Polistes canadensis pca-miR-281-3p mature miRNA
Sequence 60 - UGUCAUGGAGUUGCUCUCUUUG - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26483466
    Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
    "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
    "Proc Natl Acad Sci U S A (2015) 112:13970-13975