miRBase entry: pca-mir-2796

Stem-loop pca-mir-2796


Accession
MI0037621
Description
Polistes canadensis pca-mir-2796 precursor miRNA


Sequence

aagcugaagaaaauaguuguaaaacgacaaggauAGGGGUUUCUAUCGGCCUccagcaguuacgauaguuGUAGGCCGGCGGAAACUACUUGCucuugucgcuaauaau
.(((((.......)))))......((((((((.(((((((((((.(((((((.((((..........)))).))))))).))))))).)))).))))))))........

Structure
aagcugaagaaaauaguuguaaaa        a    -       A       c    aguu 
                        cgacaagg uAGG GGUUUCU UCGGCCU cagc    a
                        |||||||| |||| ||||||| ||||||| ||||     
                        gcuguucu GUUC UCAAAGG GGCCGGA Guug    c
----------------uaauaauc        C    A       C       U    auag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pca-miR-2796-5p

Accession MIMAT0045935
Description Polistes canadensis pca-miR-2796-5p mature miRNA
Sequence 35 - AGGGGUUUCUAUCGGCCU - 52
Evidence experimental
Illumina [1]

Mature pca-miR-2796-3p

Accession MIMAT0045936
Description Polistes canadensis pca-miR-2796-3p mature miRNA
Sequence 71 - GUAGGCCGGCGGAAACUACUUGC - 93
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26483466
    Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
    "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
    "Proc Natl Acad Sci U S A (2015) 112:13970-13975