miRBase entry: tca-mir-3851l-4

Stem-loop tca-mir-3851l-4

Accession

MI0037641

Description

Tribolium castaneum tca-mir-3851l-4 precursor miRNA

Sequence

GGUUGGCAUAAGGUGGUACCAUGuaacauuuuaacccaUAGUACGAUCCAUGCCGACUCAg
(((((((((..(((.((((.(((.............))).)))).))).)))))))))...

Structure

---         AA   G    C   uaaca 
   GGUUGGCAU  GGU GUAC AUG     u
   |||||||||  ||| |||| |||     u
   UCAGCCGUA  CUA CAUG Uac     u
gAC         -C   G    A   ccaau

Annotation confidence Not enough data

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Genome context

Unmapped66: 8276-8336 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from tca-mir-3851l-4

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tca-miR-3851l-5p

Accession	MIMAT0045476
Description	Tribolium castaneum tca-miR-3851l-5p mature miRNA
Sequence	1 - GGUUGGCAUAAGGUGGUACCAUG - 23
Evidence	experimental Illumina [1]

Mature tca-miR-3851l-4-3p

Accession	MIMAT0045967
Description	Tribolium castaneum tca-miR-3851l-4-3p mature miRNA
Sequence	39 - UAGUACGAUCCAUGCCGACUCA - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 26518483
MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
"Ninova M, Ronshaugen M, Griffiths-Jones S"
"Genome Res (2016) 26:85-96