miRBase entry: mes-MIR482e

Stem-loop mes-MIR482e


Accession
MI0037915
Description
Manihot esculenta mes-MIR482e precursor miRNA


Sequence

aguuaggauuuucagaagguugcgggaugggugggugggugagaugaccaauuaauggaucucaauugauuguguucaUCUUACCUACACCGCCCAUGCCuuggguuuccgauuauuccucccuc
((..((((...((.((((.(((.((.((((((((((((((((((((((((((((((........)))))))).).))))))))))))).)))))))).)).))).)))).))....))))..)).

Structure
-  uu    -uuu  a    g   c  g        -             - -        gga 
 ag  agga    uc gaag uug gg augggugg gugggugagauga c caauuaau   u
 ||  ||||    || |||| ||| || |||||||| ||||||||||||| | ||||||||    
 uc  uccu    ag cuuu ggu CC UACCCGCC CAUCCAUUCUacu g guuaguua   c
c  cc    uauu  c    g   u  G        A             u u        acu 


Annotation confidence Not enough data
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Genome context
scaffold03363: 631489-631613 [+]

Database links

Mature mes-miR482e

Accession MIMAT0045979
Description Manihot esculenta mes-miR482e mature miRNA
Sequence 79 - UCUUACCUACACCGCCCAUGCC - 100
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26822616
    High-resolution identification and abundance profiling of cassava (Manihot esculenta Crantz) microRNAs
    Khatabi B, Arikit S, Xia R, Winter S, Oumar D, Mongomake K, Meyers BC, Fondong VN
    BMC Genomics (2016) 17:85