miRBase entry: aae-mir-11893-2

Stem-loop aae-mir-11893-2


Accession
MI0037926
Description
Aedes aegypti aae-mir-11893-2 precursor miRNA


Sequence

6281 reads, 322 reads per million, 2 experiments
augguaaguagauaaaucagaaagacguuuuuaucguuucUUCCUGACUUAUACGCUUACCUc
..(((((((..((((.((((.((((((.......))..)))).)))).))))..)))))))..

Structure
au       ag    a    a    --  uu 
  gguaagu  auaa ucag aaga  cg  u
  |||||||  |||| |||| ||||  ||  u
  CCAUUCG  UAUU AGUC UUcu  gc  u
cU       CA    C    C    uu  ua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
supercont1.154: 394984-395046 [+]

Database links

Mature aae-miR-11893

Accession MIMAT0045989
Description Aedes aegypti aae-miR-11893 mature miRNA
Sequence 41 - UUCCUGACUUAUACGCUUACCU - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26914027
    Small RNA Profiling in Dengue Virus 2-Infected Aedes Mosquito Cells Reveals Viral piRNAs and Novel Host miRNAs
    Miesen P, Ivens A, Buck AH, van Rij RP
    PLoS Negl Trop Dis (2016) 10:e0004452