miRBase entry: aae-mir-11894a-3

Stem-loop aae-mir-11894a-3


Accession
MI0037929
Description
Aedes aegypti aae-mir-11894a-3 precursor miRNA


Sequence

18017 reads, 904 reads per million, 2 experiments
gauggguugucuugaaaugguaaagagugucaaccaucaucUUUACCAUUUCAAGAUGACCUAuu
((((((((((((((((((((((((((.((........))))))))))))))))))))))))))))

Structure
                          g  uca 
gauggguugucuugaaaugguaaaga ug   a
|||||||||||||||||||||||||| ||    
uuAUCCAGUAGAACUUUACCAUUUcu ac   c
                          -  uac 


Annotation confidence Not enough data
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Genome context
supercont1.210: 626320-626384 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from aae-mir-11894a-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature aae-miR-11894a

Accession MIMAT0045990
Description Aedes aegypti aae-miR-11894a mature miRNA
Sequence 42 - UUUACCAUUUCAAGAUGACCUA - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26914027
    Small RNA Profiling in Dengue Virus 2-Infected Aedes Mosquito Cells Reveals Viral piRNAs and Novel Host miRNAs
    Miesen P, Ivens A, Buck AH, van Rij RP
    PLoS Negl Trop Dis (2016) 10:e0004452