miRBase entry: aae-mir-11896

Stem-loop aae-mir-11896


Accession
MI0037935
Description
Aedes aegypti aae-mir-11896 precursor miRNA


Sequence

788 reads, 41 reads per million, 2 experiments
accucggucaauccggaacuguuggcucggcacaaaagcgacCACAAGGCCGGAUUGAUCAAGAgu
..((((((((((((((..((..(((.(((.........))))))..)).)))))))))))..))).

Structure
ac   --           aa  gu   c   gca 
  cuc  ggucaauccgg  cu  ugg ucg   c
  |||  |||||||||||  ||  ||| |||   a
  gAG  CUAGUUAGGCC  GA  ACc agc   a
-u   AA           -G  AC   -   gaa 


Annotation confidence High
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Genome context
supercont1.52: 1745834-1745899 [+]

Database links

Mature aae-miR-11896

Accession MIMAT0045994
Description Aedes aegypti aae-miR-11896 mature miRNA
Sequence 43 - CACAAGGCCGGAUUGAUCAAGA - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26914027
    Small RNA Profiling in Dengue Virus 2-Infected Aedes Mosquito Cells Reveals Viral piRNAs and Novel Host miRNAs
    Miesen P, Ivens A, Buck AH, van Rij RP
    PLoS Negl Trop Dis (2016) 10:e0004452