miRBase entry: aae-mir-11902

Stem-loop aae-mir-11902


Accession
MI0037943
Description
Aedes aegypti aae-mir-11902 precursor miRNA


Sequence

7 reads, 1 reads per million, 2 experiments
agggcgugacgccaucuacaaggaguaucuguucaagAACUUCAACGAAGCGUUCGGCUUc
.((((..(((((..((.....(((((.(((.....))))))))...)).)))))..)))).

Structure
a    gu     ca  uacaa     a   g 
 gggc  gacgc  uc     ggagu ucu u
 ||||  |||||  ||     ||||| ||| u
 UUCG  UUGCG  AG     CUUCA Aga c
c    GC     -A  --CAA     -   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
supercont1.71: 1610978-1611038 [+]

Database links

Mature aae-miR-11902

Accession MIMAT0046001
Description Aedes aegypti aae-miR-11902 mature miRNA
Sequence 38 - AACUUCAACGAAGCGUUCGGCUU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26914027
    Small RNA Profiling in Dengue Virus 2-Infected Aedes Mosquito Cells Reveals Viral piRNAs and Novel Host miRNAs
    Miesen P, Ivens A, Buck AH, van Rij RP
    PLoS Negl Trop Dis (2016) 10:e0004452