miRBase entry: gmo-mir-214-2

Stem-loop gmo-mir-214-2


Accession
MI0037985
Description
Gadus morhua gmo-mir-214-2 precursor miRNA

Literature search
1 open access papers mention gmo-mir-214-2
(1 sentences)

Sequence

UGCCUGUCUUCACUUGCUGUGCaguaauugguucagccuguACAGCAGGCACAGACAGGCAGa
(((((((((...((((((((((((...(((...))).))))))))))))...)))))))))..

Structure
--         UCA            uaa   g 
  UGCCUGUCU   CUUGCUGUGCag   uug  
  |||||||||   ||||||||||||   ||| u
  ACGGACAGA   GGACGACAuguc   gac  
aG         CAC            --c   u 


Annotation confidence Not enough data
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Genome context
HE566539.1: 1051641-1051703 [+]

Database links

Mature gmo-miR-214-3p

Accession MIMAT0044209
Description Gadus morhua gmo-miR-214-3p mature miRNA
Sequence 42 - ACAGCAGGCACAGACAGGCAG - 62
Evidence experimental
SOLiD [1]

Mature gmo-miR-214-2-5p

Accession MIMAT0046035
Description Gadus morhua gmo-miR-214-2-5p mature miRNA
Sequence 1 - UGCCUGUCUUCACUUGCUGUGC - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27128807
    Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua): Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs
    Andreassen R, Rangnes F, Sivertsen M, Chiang M, Tran M, Worren MM
    PLoS One (2016) 11:e0153324