miRBase entry: gmo-mir-459

Stem-loop gmo-mir-459


Accession
MI0037993
Description
Gadus morhua gmo-mir-459 precursor miRNA


Sequence

UCAGUAACAAGGAUUCAUCCUGUugucaccauagaaagcaaCAGGAAGUCACUGUUACUGGCC
.((((((((..((((..(((((((((...........)))))))))))))..))))))))...

Structure
--U        AG    CA         cacc 
   CAGUAACA  GAUU  UCCUGUugu    a
   ||||||||  ||||  |||||||||    u
   GUCAUUGU  CUGA  AGGACaacg    a
CCG        CA    --         aaag 


Annotation confidence Not enough data
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Genome context
CAEA01022471.1: 245-307 [-]

Database links

Mature gmo-miR-459-5p

Accession MIMAT0046048
Description Gadus morhua gmo-miR-459-5p mature miRNA
Sequence 1 - UCAGUAACAAGGAUUCAUCCUGU - 23
Evidence experimental
Illumina [1]

Mature gmo-miR-459-3p

Accession MIMAT0046049
Description Gadus morhua gmo-miR-459-3p mature miRNA
Sequence 42 - CAGGAAGUCACUGUUACUGGCC - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27128807
    Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua): Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs
    Andreassen R, Rangnes F, Sivertsen M, Chiang M, Tran M, Worren MM
    PLoS One (2016) 11:e0153324