miRBase entry: gmo-mir-7552-2

Stem-loop gmo-mir-7552-2


Accession
MI0037997
Description
Gadus morhua gmo-mir-7552-2 precursor miRNA

Literature search
0 open access papers mention gmo-mir-7552-2
(0 sentences)

Sequence

UUACAAUUAAAGGAUAUUUCUUucgaaugaauaagauucagAAAUGCCUUUUAAUUGUUUGGC
..(((((((((((.(((((((...((((.......))))))))))).))))))))))).....

Structure
---UU           A       Uuc    ga 
     ACAAUUAAAGG UAUUUCU   gaau  a
     ||||||||||| |||||||   ||||  u
     UGUUAAUUUUC GUAAAga   cuua  a
CGGUU           C       ---    ga 


Annotation confidence Not enough data
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Genome context
CAEA01013908.1: 541-603 [-]

Database links

Mature gmo-miR-7552-5p

Accession MIMAT0044381
Description Gadus morhua gmo-miR-7552-5p mature miRNA
Sequence 1 - UUACAAUUAAAGGAUAUUUCUU - 22
Evidence experimental
SOLiD [1], Illumina [2]

Mature gmo-miR-7552-3p

Accession MIMAT0046053
Description Gadus morhua gmo-miR-7552-3p mature miRNA
Sequence 42 - AAAUGCCUUUUAAUUGUUUGGC - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27128807
    Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua): Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs
    Andreassen R, Rangnes F, Sivertsen M, Chiang M, Tran M, Worren MM
    PLoS One (2016) 11:e0153324