miRBase entry: gmo-mir-11930

Stem-loop gmo-mir-11930


Accession
MI0038000
Description
Gadus morhua gmo-mir-11930 precursor miRNA


Sequence

AAAAUCCACACAUCAGCACGGAuuauccauaagcacguucgUAUGCUGAUCCGCGGAUUUCCC
.((((((.(..((((((((((((.............))))))..))))))..).))))))...

Structure
--A      A AC      --      uaucc 
   AAAUCC C  AUCAGC  ACGGAu     a
   |||||| |  ||||||  ||||||     u
   UUUAGG G  UAGUCG  Ugcuug     a
CCC      C CC      UA      cacga 


Annotation confidence Not enough data
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Genome context
HE567695.1: 897992-898054 [-]

Database links

Mature gmo-miR-11930-5p

Accession MIMAT0046058
Description Gadus morhua gmo-miR-11930-5p mature miRNA
Sequence 1 - AAAAUCCACACAUCAGCACGGA - 22
Evidence experimental
Illumina [1]

Mature gmo-miR-11930-3p

Accession MIMAT0046059
Description Gadus morhua gmo-miR-11930-3p mature miRNA
Sequence 42 - UAUGCUGAUCCGCGGAUUUCCC - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27128807
    Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua): Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs
    Andreassen R, Rangnes F, Sivertsen M, Chiang M, Tran M, Worren MM
    PLoS One (2016) 11:e0153324