miRBase entry: gmo-mir-11932

Stem-loop gmo-mir-11932


Accession
MI0038002
Description
Gadus morhua gmo-mir-11932 precursor miRNA


Sequence

GUAUGCAUUCUUGACUGUUAGCUguagcgccuuacuugCUGCAGUCCUGUAUGCAUUCUU
..((((((.(..((((((.(((.((((....))))..)))))))))..).))))))....

Structure
--GU      U UU      U   -U    c 
    AUGCAU C  GACUGU AGC  guag g
    |||||| |  |||||| |||  ||||  
    UACGUA G  CUGACG UCg  cauu c
UUCU      U UC      -   uu    c 


Annotation confidence Not enough data
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Genome context
CAEA01430778.1: 8-67 [-]

Database links

Mature gmo-miR-11932-5p

Accession MIMAT0046062
Description Gadus morhua gmo-miR-11932-5p mature miRNA
Sequence 1 - GUAUGCAUUCUUGACUGUUAGCU - 23
Evidence experimental
Illumina [1]

Mature gmo-miR-11932-3p

Accession MIMAT0046063
Description Gadus morhua gmo-miR-11932-3p mature miRNA
Sequence 39 - CUGCAGUCCUGUAUGCAUUCUU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27128807
    Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua): Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs
    Andreassen R, Rangnes F, Sivertsen M, Chiang M, Tran M, Worren MM
    PLoS One (2016) 11:e0153324