Stem-loop gmo-mir-11933

Accession

MI0038003

Description

Gadus morhua gmo-mir-11933 precursor miRNA

Sequence

UUCUUCUCCAGAGUUGCCGAGGccucacgcccUCGCCAACUCUGGAGAAGAAU
((((((((((((((((.(((((.(....).))))).)))))))))))))))).

Structure

-                C     c u 
 UUCUUCUCCAGAGUUG CGAGG c c
 |||||||||||||||| ||||| |  
 AAGAAGAGGUCUCAAC GCUcc g a
U                C     c c 

Annotation confidence Not enough data

Genome context

HE571613.1: 189450-189502 [-]

Mature gmo-miR-11933-5p

• Accession: MIMAT0046064
• Description: Gadus morhua gmo-miR-11933-5p mature miRNA
• Sequence: 1 - UUCUUCUCCAGAGUUGCCGAGG - 22
• Evidence: experimental ; Illumina [1]

Mature gmo-miR-11933-3p

• Accession: MIMAT0046065
• Description: Gadus morhua gmo-miR-11933-3p mature miRNA
• Sequence: 33 - UCGCCAACUCUGGAGAAGAAU - 53
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27128807
   Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua): Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs
   Andreassen R, Rangnes F, Sivertsen M, Chiang M, Tran M, Worren MM
   PLoS One (2016) 11:e0153324