miRBase entry: pte-bantam

Stem-loop pte-bantam


Accession
MI0038009
Description
Parasteatoda tepidariorum pte-bantam precursor miRNA


Sequence

CUGGUUUUCCCAAUGAUCAUCCAgaggaauauaugaaaucUGAGAUCAUUGUGAAAGCUGAUU
..(((((((.((((((((...((((.............)))).)))))))).)))))))....

Structure
--CU       C        AUC    ggaau 
    GGUUUUC CAAUGAUC   CAga     a
    ||||||| ||||||||   ||||     u
    UCGAAAG GUUACUAG   GUcu     a
UUAG       U        --A    aaagu 


Annotation confidence Not enough data
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Genome context
Scf5bK3_3958: 148742-148804 [+]

Database links

Mature pte-bantam-5p

Accession MIMAT0046075
Description Parasteatoda tepidariorum pte-bantam-5p mature miRNA
Sequence 1 - CUGGUUUUCCCAAUGAUCAUCCA - 23
Evidence experimental
Illumina [1]

Mature pte-bantam-3p

Accession MIMAT0046076
Description Parasteatoda tepidariorum pte-bantam-3p mature miRNA
Sequence 41 - UGAGAUCAUUGUGAAAGCUGAUU - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144