Stem-loop pte-let-7

Accession

MI0038014

Description

Parasteatoda tepidariorum pte-let-7 precursor miRNA

Literature search

1 open access papers mention pte-let-7
(4 sentences)

Sequence

UGAGGUAGUAGGUUGUAUAGUUuagaacuacaccuuuaaugggcgaaCUAUACAGCUUGCUAACUUUCC
.((((((((((((((((((((((.(..(............)..)))))))))))))))))).)))))..

Structure

-U     -                 a aa uacac 
  GAGGU AGUAGGUUGUAUAGUUu g  c     c
  ||||| ||||||||||||||||| |  |      
  UUUCA UCGUUCGACAUAUCaag c  g     u
CC     A                 - gg uaauu 

Annotation confidence Not enough data

Genome context

Scf5bK3_446: 4924728-4924796 [+]

Mature pte-let-7-5p

• Accession: MIMAT0046082
• Description: Parasteatoda tepidariorum pte-let-7-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGGUUGUAUAGUU - 22
• Evidence: experimental ; Illumina [1]

Mature pte-let-7-3p

• Accession: MIMAT0046083
• Description: Parasteatoda tepidariorum pte-let-7-3p mature miRNA
• Sequence: 48 - CUAUACAGCUUGCUAACUUUCC - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144