miRBase entry: pte-mir-278b

Stem-loop pte-mir-278b


Accession
MI0038035
Description
Parasteatoda tepidariorum pte-mir-278b precursor miRNA

Literature search
1 open access papers mention pte-mir-278b
(1 sentences)

Sequence

CCGGAAGAGAAUUCCCACCUUAACCguucuauagcaaaaggUCGGUGGGAUUUUCGUCCGUCU
.((((.((((((.((((((...(((..............))).)))))))))))).))))...

Structure
--C    A      U      UUA   guucua 
   CGGA GAGAAU CCCACC   ACC      u
   |||| |||||| ||||||   |||       
   GCCU CUUUUA GGGUGG   Ugg      a
UCU    G      -      --C   aaaacg 


Annotation confidence Not enough data
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Genome context
Scf5bK3_214: 1515459-1515521 [-]

Database links

Mature pte-miR-278b-5p

Accession MIMAT0046122
Description Parasteatoda tepidariorum pte-miR-278b-5p mature miRNA
Sequence 1 - CCGGAAGAGAAUUCCCACCUUAACC - 25
Evidence experimental
Illumina [1]

Mature pte-miR-278b-3p

Accession MIMAT0046123
Description Parasteatoda tepidariorum pte-miR-278b-3p mature miRNA
Sequence 42 - UCGGUGGGAUUUUCGUCCGUCU - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144