Stem-loop sequence pte-mir-2f

AccessionMI0038048 (change log)
DescriptionParasteatoda tepidariorum miR-2f stem-loop
Literature search

2 open access papers mention pte-mir-2f
(17 sentences)

Stem-loop
   ---           cu      a   ugu  uu 
5'    cgucgaaugug  cuguga aug   ug  u
      |||||||||||  |||||| |||   ||   
3'    guaguuuacac  gacacu uac   ac  c
   cgc           -c      a   uau  cu 
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates Overlapping transcripts
Scf5bK3_595: 730975-731038 [-]
intergenic
Clustered miRNAs
< 10kb from pte-mir-2f
pte-mir-71-2Scf5bK3_595: 731101-731161 [-]
pte-mir-2fScf5bK3_595: 730975-731038 [-]
pte-mir-2aScf5bK3_595: 726238-726302 [-]
pte-mir-2b-1Scf5bK3_595: 726122-726186 [-]
Database links

Mature sequence pte-miR-2f-5p

Accession MIMAT0046147
Sequence

1 - 

cgucgaaugugcucugugaaaug

 - 23

Get sequence
Evidence experimental; Illumina [1]

Mature sequence pte-miR-2f-3p

Accession MIMAT0046148
Sequence

42 - 

uaucacagccacauuugaugcgc

 - 64

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:27324919 "Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum" Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP Genome Biol Evol. 8:2133-2144(2016).