Stem-loop sequence pte-mir-35m

AccessionMI0038072 (change log)
DescriptionParasteatoda tepidariorum miR-35m stem-loop
Stem-loop
   --     -     g        g   u u 
5'   agcaa ucaau gcucggug cag g c
     ||||| ||||| |||||||| ||| | u
3'   ucguu aguug ugggccac guc c u
   uu     u     a        a   - g 
Get sequence
Confidence
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Genome context
Coordinates Overlapping transcripts
Scf5bK3_73: 4580855-4580911 [-]
intergenic
Clustered miRNAs
< 10kb from pte-mir-35m
pte-mir-35xScf5bK3_73: 4589896-4589952 [-]
pte-mir-35o-2Scf5bK3_73: 4588710-4588766 [-]
pte-mir-35yScf5bK3_73: 4588113-4588169 [-]
pte-mir-35vScf5bK3_73: 4584309-4584365 [-]
pte-mir-35uScf5bK3_73: 4583750-4583806 [-]
pte-mir-35mScf5bK3_73: 4580855-4580911 [-]
pte-mir-35tScf5bK3_73: 4579946-4580001 [-]
Database links

Mature sequence pte-miR-35m-5p

Accession MIMAT0046190
Sequence

1 - 

agcaaucaauggcucgguggc

 - 21

Get sequence
Evidence experimental; Illumina [1]

Mature sequence pte-miR-35m-3p

Accession MIMAT0046191
Sequence

35 - 

acaccggguaguugauuugcuuu

 - 57

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:27324919 "Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum" Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP Genome Biol Evol. 8:2133-2144(2016).