Stem-loop pte-mir-35w

Accession

MI0038077

Description

Parasteatoda tepidariorum pte-mir-35w precursor miRNA

Sequence

AGCAAUGAAUGGCUUGGUGGCagugucucgccugACACCAGUUCGUUUAUUUGCUUU
((((((((((((.((((((.(((.((...))))).)))))).))))))).)))))..

Structure

--     -       C      G   u  c 
  AGCAA UGAAUGG UUGGUG Cag gu  
  ||||| ||||||| |||||| ||| || u
  UCGUU AUUUGCU GACCAC guc cg  
UU     U       U      A   -  c 

Annotation confidence Not enough data

Genome context

Scf5bK3_73: 4665401-4665457 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from pte-mir-35w

Mature pte-miR-35w-5p

• Accession: MIMAT0046198
• Description: Parasteatoda tepidariorum pte-miR-35w-5p mature miRNA
• Sequence: 1 - AGCAAUGAAUGGCUUGGUGGC - 21
• Evidence: experimental ; Illumina [1]

Mature pte-miR-35w-3p

• Accession: MIMAT0046199
• Description: Parasteatoda tepidariorum pte-miR-35w-3p mature miRNA
• Sequence: 35 - ACACCAGUUCGUUUAUUUGCUUU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144