miRBase entry: pte-mir-375-1

Stem-loop pte-mir-375-1


Accession
MI0038088
Description
Parasteatoda tepidariorum pte-mir-375-1 precursor miRNA


Sequence

GACUUGAGCUGCUCGCACAAAGCuccauuaaaauguUUUGUUCGUUCGGCUCGAGUUA
(((((((((((..((.(((((((...........))))))).))..))))))))))).

Structure
-           CU  C       ucca 
 GACUUGAGCUG  CG ACAAAGC    u
 |||||||||||  || |||||||    u
 UUGAGCUCGGC  GC UGUUUug    a
A           UU  U       uaaa 


Annotation confidence Not enough data
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Genome context
Scf5bK3_2865: 552797-552854 [-]

Database links

Mature pte-miR-375-5p

Accession MIMAT0046212
Description Parasteatoda tepidariorum pte-miR-375-5p mature miRNA
Sequence 1 - GACUUGAGCUGCUCGCACAAAGC - 23
Evidence experimental
Illumina [1]

Mature pte-miR-375-3p

Accession MIMAT0046213
Description Parasteatoda tepidariorum pte-miR-375-3p mature miRNA
Sequence 37 - UUUGUUCGUUCGGCUCGAGUUA - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144