miRBase entry: pte-mir-92b-1

Stem-loop pte-mir-92b-1


Accession
MI0038101
Description
Parasteatoda tepidariorum pte-mir-92b-1 precursor miRNA


Sequence

AGGUCGGGAUGACUGGCAGUAUUuguucuauucaacgaaUAUUGCACUCGUCCCGGCCUA
((((((((((((...((((((((((((......))))))))))))..)))))))))))).

Structure
-            CUG            cu 
 AGGUCGGGAUGA   GCAGUAUUuguu  a
 ||||||||||||   ||||||||||||   
 UCCGGCCCUGCU   CGUUAUaagcaa  u
A            -CA            cu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Scf5bK3_2017: 1656729-1656788 [-]

Database links

Mature pte-miR-92b-5p

Accession MIMAT0046235
Description Parasteatoda tepidariorum pte-miR-92b-5p mature miRNA
Sequence 1 - AGGUCGGGAUGACUGGCAGUAUU - 23
Evidence experimental
Illumina [1]

Mature pte-miR-92b-3p

Accession MIMAT0046236
Description Parasteatoda tepidariorum pte-miR-92b-3p mature miRNA
Sequence 40 - UAUUGCACUCGUCCCGGCCUA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144