miRBase entry: pte-mir-11942a

Stem-loop pte-mir-11942a


Accession
MI0038112
Description
Parasteatoda tepidariorum pte-mir-11942a precursor miRNA

Literature search
1 open access papers mention pte-mir-11942a
(2 sentences)

Sequence

CGUUAAGACUGUCAGUGUUUGGCuguguuauauuuucugcCAAAUACUGACAGUCUUACCAA
.(.((((((((((((((((((((...............)))))))))))))))))))).)..

Structure
-C U                    uguguu 
  G UAAGACUGUCAGUGUUUGGC      a
  | ||||||||||||||||||||      u
  C AUUCUGACAGUCAUAAACcg      a
AA C                    ucuuuu 


Annotation confidence Not enough data
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Genome context
Scf5bK3_165.1: 1758563-1758624 [-]

Database links

Mature pte-miR-11942a-5p

Accession MIMAT0046254
Description Parasteatoda tepidariorum pte-miR-11942a-5p mature miRNA
Sequence 1 - CGUUAAGACUGUCAGUGUUUGGC - 23
Evidence experimental
Illumina [1]

Mature pte-miR-11942a-3p

Accession MIMAT0046255
Description Parasteatoda tepidariorum pte-miR-11942a-3p mature miRNA
Sequence 41 - CAAAUACUGACAGUCUUACCAA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144