miRBase entry: pte-mir-11947a-2

Stem-loop pte-mir-11947a-2


Accession
MI0038122
Description
Parasteatoda tepidariorum pte-mir-11947a-2 precursor miRNA


Sequence

AUGUGUUCAUAGUCUGUUAGUUAgcgucuccgcuaaaUUAACAGACUAUGAACACAUUU
((((((((((((((((((((((((((....)))).))))))))))))))))))))))..

Structure
--                      -    u 
  AUGUGUUCAUAGUCUGUUAGUU Agcg c
  |||||||||||||||||||||| ||||  
  UACACAAGUAUCAGACAAUUaa ucgc u
UU                      a    c 


Annotation confidence Not enough data
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Genome context
Scf5bK3_1054: 3732459-3732517 [-]

Database links

Mature pte-miR-11947a-5p

Accession MIMAT0046272
Description Parasteatoda tepidariorum pte-miR-11947a-5p mature miRNA
Sequence 1 - AUGUGUUCAUAGUCUGUUAGUUA - 23
Evidence experimental
Illumina [1]

Mature pte-miR-11947a-3p

Accession MIMAT0046273
Description Parasteatoda tepidariorum pte-miR-11947a-3p mature miRNA
Sequence 38 - UUAACAGACUAUGAACACAUUU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144