miRBase entry: pte-mir-11967

Stem-loop pte-mir-11967


Accession
MI0038154
Description
Parasteatoda tepidariorum pte-mir-11967 precursor miRNA


Sequence

AGAUGCUGCGCUAUGAGUUAUUuuguuuuaaauaaUAACUCAAAGUCGUAGCUUCGGU
.((.((((((((.(((((((((...........))))))))).)).)))))).))...

Structure
--A  U      -  A         uugu 
   GA GCUGCG CU UGAGUUAUU    u
   || |||||| || |||||||||    u
   CU CGAUGC GA ACUCAAUaa    u
UGG  U      U  A         uaaa 


Annotation confidence Not enough data
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Genome context
Scf5bK3_2892.1: 209561-209618 [+]

Database links

Mature pte-miR-11967-5p

Accession MIMAT0046328
Description Parasteatoda tepidariorum pte-miR-11967-5p mature miRNA
Sequence 1 - AGAUGCUGCGCUAUGAGUUAUU - 22
Evidence experimental
Illumina [1]

Mature pte-miR-11967-3p

Accession MIMAT0046329
Description Parasteatoda tepidariorum pte-miR-11967-3p mature miRNA
Sequence 36 - UAACUCAAAGUCGUAGCUUCGGU - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144