Stem-loop sequence bta-mir-2285as-1

Accession

MI0038161 (change log)

Description

Bos taurus miR-2285as-1 stem-loop

Literature search

11 open access papers mention bta-mir-2285as-1
(15 sentences)

Stem-loop

   --               au     c    a 
5'   aaaaaguucguucag  cuuuc auau a
     |||||||||||||||  ||||| ||||  
3'   uuuuucaaguaaguc  gaaag uaug u
   gg               cc     a    u 

Deep sequencing

347 reads, 13.6 reads per million, 59 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr10: 28921766-28921825 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038161

Mature sequence bta-miR-2285as

• Accession: MIMAT0046338
• Sequence: 39 - aagcccugaaugaacuuuuugg - 60
• Deep sequencing: 619 reads, 58 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:27100870 "Comparative Analysis of the miRNome of Bovine Milk Fat, Whey and Cells" Li R, Dudemaine PL, Zhao X, Lei C, Ibeagha-Awemu EM PLoS One. 11:e0154129(2016).