Stem-loop sequence bta-mir-2285aw

Accession

MI0038171 (change log)

Description

Bos taurus miR-2285aw stem-loop

Literature search

11 open access papers mention bta-mir-2285aw
(15 sentences)

Stem-loop

   -        c   ug      u  uuuaa 
5'  aagaaguu guu  gguuuu cc     g
    |||||||| |||  |||||| ||      
3'  uuuuucaa caa  ccaaaa gg     u
   g        a   gu      -  uaugg 

Deep sequencing

10358 reads, 45.5 reads per million, 66 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr13: 19209401-19209458 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038171

Mature sequence bta-miR-2285aw

• Accession: MIMAT0046348
• Sequence: 38 - aaaaccugaacaaacuuuuug - 58
• Deep sequencing: 3812 reads, 43 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:27100870 "Comparative Analysis of the miRNome of Bovine Milk Fat, Whey and Cells" Li R, Dudemaine PL, Zhao X, Lei C, Ibeagha-Awemu EM PLoS One. 11:e0154129(2016).