miRBase entry: xla-let-7i

Stem-loop xla-let-7i


Accession
MI0038225
Description
Xenopus laevis xla-let-7i precursor miRNA

Literature search
2 open access papers mention xla-let-7i
(2 sentences)

Sequence

UGAGGUAGUAGUUUGUGCUGUuggucggguugugacacugcccgcuguggagauaacUGCGCAAGCUACUGCCUUGCU
.(((((((((((((((((.(((((.(((((.((...)).)))))))........))).)))))))))))))))))...

Structure
--U                 U   --------  u     u  g 
   GAGGUAGUAGUUUGUGC GUu        gg cgggu gu  
   ||||||||||||||||| |||        || ||||| || a
   UUCCGUCAUCGAACGCG caa        uc gcccg ca  
UCG                 U   uagaggug  -     u  c 


Annotation confidence Not enough data
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Genome context
chr3S: 89483139-89483216 [+]

Database links

Mature xla-let-7i-5p

Accession MIMAT0046407
Description Xenopus laevis xla-let-7i-5p mature miRNA
Sequence 1 - UGAGGUAGUAGUUUGUGCUGU - 21
Evidence experimental
Illumina [1]

Mature xla-let-7i-3p

Accession MIMAT0046408
Description Xenopus laevis xla-let-7i-3p mature miRNA
Sequence 58 - UGCGCAAGCUACUGCCUUGCU - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26548531
    Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
    "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
    "Dev Biol (2016) 409:26-38