miRBase entry: xla-mir-138-1

Stem-loop xla-mir-138-1


Accession
MI0038250
Description
Xenopus laevis xla-mir-138-1 precursor miRNA

Literature search
1 open access papers mention xla-mir-138-1
(1 sentences)

Sequence

AGCUGGUGUUGUGAAUCAGGCCGugaccacucagaaaacgGCUACUUCACAACACCAGGGUU
..(((((((((((((...((((((.............))))))..)))))))))))))....

Structure
--AG             UCA      gacca 
    CUGGUGUUGUGAA   GGCCGu     c
    |||||||||||||   ||||||     u
    GACCACAACACUU   UCGgca     c
UUGG             -CA      aaaga 


Annotation confidence Not enough data
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Genome context
chr6L: 46038632-46038693 [-]

Database links

Mature xla-miR-138-5p

Accession MIMAT0046449
Description Xenopus laevis xla-miR-138-5p mature miRNA
Sequence 1 - AGCUGGUGUUGUGAAUCAGGCCG - 23
Evidence experimental
Illumina [1]

Mature xla-miR-138-3p

Accession MIMAT0046451
Description Xenopus laevis xla-miR-138-3p mature miRNA
Sequence 41 - GCUACUUCACAACACCAGGGUU - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26548531
    Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
    "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
    "Dev Biol (2016) 409:26-38