miRBase entry: xla-mir-142-2

Stem-loop xla-mir-142-2


Accession
MI0038253
Description
Xenopus laevis xla-mir-142-2 precursor miRNA


Sequence

CAUAAAGUAGAAAGCACUACUAgacagcacugaacgcUGUAGUGUUUCCUACUUUAUGGA
((((((((((.(((((((.....(((((.......)))))))))))).))))))))))..

Structure
--          A       ACUAg     ac 
  CAUAAAGUAG AAGCACU     acagc  u
  |||||||||| |||||||     |||||  g
  GUAUUUCAUC UUUGUGA     UGUcg  a
AG          C       -----     ca 


Annotation confidence Not enough data
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Genome context
chr2S: 31372004-31372063 [+]

Database links

Mature xla-miR-142-5p

Accession MIMAT0046454
Description Xenopus laevis xla-miR-142-5p mature miRNA
Sequence 1 - CAUAAAGUAGAAAGCACUACUA - 22
Evidence experimental
Illumina [1]

Mature xla-miR-142-3p

Accession MIMAT0046455
Description Xenopus laevis xla-miR-142-3p mature miRNA
Sequence 38 - UGUAGUGUUUCCUACUUUAUGGA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26548531
    Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
    "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
    "Dev Biol (2016) 409:26-38