miRBase entry: xla-mir-191

Stem-loop xla-mir-191


Accession
MI0038279
Description
Xenopus laevis xla-mir-191 precursor miRNA


Sequence

CAACGGAAUCCCAAAAGCAGCUguuguggaaauguucagCUGCAGUUGGGACCCGUUCAC
.(((((..((((((..(((((((.............)))))))..)))))).)))))...

Structure
--C     AA      AA       uugug 
   AACGG  UCCCAA  GCAGCUg     g
   |||||  ||||||  |||||||     a
   UUGCC  AGGGUU  CGUCgac     a
CAC     -C      GA       uugua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr4S: 99615962-99616021 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from xla-mir-191
Name Accession Chromosome Start End Strand Confidence




Database links

Mature xla-miR-191-5p

Accession MIMAT0046502
Description Xenopus laevis xla-miR-191-5p mature miRNA
Sequence 1 - CAACGGAAUCCCAAAAGCAGCU - 22
Evidence experimental
Illumina [1]

Mature xla-miR-191-3p

Accession MIMAT0046503
Description Xenopus laevis xla-miR-191-3p mature miRNA
Sequence 40 - CUGCAGUUGGGACCCGUUCAC - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26548531
    Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
    "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
    "Dev Biol (2016) 409:26-38