miRBase entry: xla-mir-216

Stem-loop xla-mir-216


Accession
MI0038298
Description
Xenopus laevis xla-mir-216 precursor miRNA


Sequence

UAAUCUCAGCUGGCAACUGUGAGcgguuaauaaauuaucuCACAGUGGUCUCUGGGAUUAUG
(((((((((..(((.((((((((.((((....))))..)))))))).))).)))))))))..

Structure
--         CU   A        -c    a 
  UAAUCUCAG  GGC ACUGUGAG  gguu a
  |||||||||  ||| ||||||||  ||||  
  AUUAGGGUC  CUG UGACACuc  uuaa u
GU         -U   G        ua    a 


Annotation confidence Not enough data
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Genome context
chr5L: 33680985-33681046 [+]

Database links

Mature xla-miR-216-5p

Accession MIMAT0046536
Description Xenopus laevis xla-miR-216-5p mature miRNA
Sequence 1 - UAAUCUCAGCUGGCAACUGUGAG - 23
Evidence experimental
Illumina [1]

Mature xla-miR-216-3p

Accession MIMAT0046537
Description Xenopus laevis xla-miR-216-3p mature miRNA
Sequence 41 - CACAGUGGUCUCUGGGAUUAUG - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26548531
    Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
    "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
    "Dev Biol (2016) 409:26-38