miRBase entry: xla-mir-217

Stem-loop xla-mir-217


Accession
MI0038299
Description
Xenopus laevis xla-mir-217 precursor miRNA


Sequence

ACUGCAUCAGGAACUGAUUGGAUcccagggagcagCCAUCAGUUCCUAAUGCAUUGC
..(((((.((((((((((.((.(((...)))....)))))))))))).)))))....

Structure
--AC     C          U  ---A   c 
    UGCAU AGGAACUGAU GG    Ucc  
    ||||| |||||||||| ||    ||| a
    ACGUA UCCUUGACUA CC    agg  
CGUU     A          -  gacg   g 


Annotation confidence Not enough data
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Genome context
chr5S: 27733495-27733551 [+]

Database links

Mature xla-miR-217-5p

Accession MIMAT0046538
Description Xenopus laevis xla-miR-217-5p mature miRNA
Sequence 1 - ACUGCAUCAGGAACUGAUUGGAU - 23
Evidence experimental
Illumina [1]

Mature xla-miR-217-3p

Accession MIMAT0046539
Description Xenopus laevis xla-miR-217-3p mature miRNA
Sequence 36 - CCAUCAGUUCCUAAUGCAUUGC - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26548531
    Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
    "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
    "Dev Biol (2016) 409:26-38