miRBase entry: xla-mir-301-1

Stem-loop xla-mir-301-1


Accession
MI0038315
Description
Xenopus laevis xla-mir-301-1 precursor miRNA

Literature search
1 open access papers mention xla-mir-301-1
(1 sentences)

Sequence

GCUCUGACUUUAUUGCACUACUguacuauacagcuagCAGUGCAAUAGUAUUGUCAAAG
....((((.((((((((((.((((........)).)).))))))))))....))))...

Structure
GCUC    ---U          A  -  acu 
    UGAC    UUAUUGCACU CU gu   a
    ||||    |||||||||| || ||    
    ACUG    GAUAACGUGA ga cg   u
-GAA    UUAU          C  u  aca 


Annotation confidence Not enough data
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Genome context
chr2S: 65501318-65501376 [+]

Database links

Mature xla-miR-301-5p

Accession MIMAT0046566
Description Xenopus laevis xla-miR-301-5p mature miRNA
Sequence 1 - GCUCUGACUUUAUUGCACUACU - 22
Evidence experimental
Illumina [1]

Mature xla-miR-301-3p

Accession MIMAT0046567
Description Xenopus laevis xla-miR-301-3p mature miRNA
Sequence 38 - CAGUGCAAUAGUAUUGUCAAAG - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26548531
    Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
    "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
    "Dev Biol (2016) 409:26-38