miRBase entry: xla-mir-449

Stem-loop xla-mir-449


Accession
MI0038335
Description
Xenopus laevis xla-mir-449 precursor miRNA

Literature search
2 open access papers mention xla-mir-449
(4 sentences)

Sequence

AGGCAGUGUAAUGUUAGCUGGUuggaaaguaucagacacCGGUUAACUUACACCUGCCCCC
.((((((((((.((((((((((.(............)))))))))))))))).)))))...

Structure
--A     -     U          u gaaag 
   GGCAG UGUAA GUUAGCUGGU g     u
   ||||| ||||| |||||||||| |      
   CCGUC ACAUU CAAUUGGCca c     a
CCC     C     -          - agacu 


Annotation confidence Not enough data
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Genome context
chr1S: 170602158-170602218 [+]

Database links

Mature xla-miR-449-5p

Accession MIMAT0046603
Description Xenopus laevis xla-miR-449-5p mature miRNA
Sequence 1 - AGGCAGUGUAAUGUUAGCUGGU - 22
Evidence experimental
Illumina [1]

Mature xla-miR-449-3p

Accession MIMAT0046604
Description Xenopus laevis xla-miR-449-3p mature miRNA
Sequence 40 - CGGUUAACUUACACCUGCCCCC - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26548531
    Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
    "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
    "Dev Biol (2016) 409:26-38