miRBase entry: xla-mir-92a-4

Stem-loop xla-mir-92a-4


Accession
MI0038339
Description
Xenopus laevis xla-mir-92a-4 precursor miRNA

Literature search
2 open access papers mention xla-mir-92a-4
(2 sentences)

Sequence

AGGUUGGGAUUGGUUGCAAUGCUguccuauuuauguagUAUUGCACUUGUCCCGGCCUGU
((((((((((.(((.(((((((((.(........))))))))))))).))))))))))..

Structure
--          U   U         u cua 
  AGGUUGGGAU GGU GCAAUGCUg c   u
  |||||||||| ||| ||||||||| |    
  UCCGGCCCUG UCA CGUUAUgau g   u
UG          U   -         - uau 


Annotation confidence Not enough data
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Genome context
chr2S: 91488294-91488353 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from xla-mir-92a-4
Name Accession Chromosome Start End Strand Confidence




Database links

Mature xla-miR-92a-3p

Accession MIMAT0011149
Description Xenopus laevis xla-miR-92a-3p mature miRNA
Sequence 39 - UAUUGCACUUGUCCCGGCCUGU - 60
Evidence not_experimental

Mature xla-miR-92a-4-5p

Accession MIMAT0046610
Description Xenopus laevis xla-miR-92a-4-5p mature miRNA
Sequence 1 - AGGUUGGGAUUGGUUGCAAUGCU - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26548531
    Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
    "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
    "Dev Biol (2016) 409:26-38