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miRBase entry: bta-mir-2285bq
Wordcloud for bta-mir-2285bq
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How is the hairpin structure generated?
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We have generated a dot-bracket structure for each sequence using RNAfold.
Unambiguous secondary structure.
Parsed and ASCII art drawn.
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Stem-loop
bta-mir-2285bq
Accession
MI0038359
Description
Bos taurus
bta-mir-2285bq precursor miRNA
Literature search
11 open access papers
mention bta-mir-2285bq
(15 sentences)
Sequence
Copy Sequence
aaauguucauucagguuuuccuacaacaucuuacagaAAAACCCGAAUGAACUUCUUGGC
....((((((((.((((((.((............)).)))))).))))))))........
Structure
----aaau a c acaac guucauuc gguuuu cu a |||||||| |||||| || CAAGUAAG CCAAAA ga u CGGUUCUU C a cauuc
Annotation confidence
Low
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Genome context
chr6: 23736734-23736793 [-]
Database links
References
PubMed ID:
26519053
Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
BMC Genomics (2015) 16:884