Stem-loop sequence bta-mir-2285br

Accession

MI0038360 (change log)

Description

Bos taurus miR-2285br stem-loop

Literature search

11 open access papers mention bta-mir-2285br
(15 sentences)

Stem-loop

   --        g   ug a      cauugc 
5'   agaaaguu guu  g uuuuuc      a
     |||||||| |||  | ||||||       
3'   ucuuucaa uaa  c aaaaag      u
   ug        g   gu c      acauuc 

Deep sequencing

7850 reads, 57.5 reads per million, 73 experiments

Confidence

Annotation confidence: high

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr8: 78063391-78063450 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038360

Mature sequence bta-miR-2285br

• Accession: MIMAT0046636
• Sequence: 39 - aaaaccugaaugaacuuucugu - 60
• Deep sequencing: 7724 reads, 73 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:26519053 "Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil" Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM BMC Genomics. 16:884(2015).