Stem-loop sequence bta-mir-2285bs

Accession

MI0038361 (change log)

Description

Bos taurus miR-2285bs stem-loop

Literature search

11 open access papers mention bta-mir-2285bs
(15 sentences)

Stem-loop

   -         ug  ug    uuu  aucgc 
5'  caaaaaguu  uu  gguu   cc     a
    |||||||||  ||  ||||   ||     u
3'  guuuuucaa  ag  ccaa   gg     c
   g         gu  gu    -uc  acauu 

Deep sequencing

10126 reads, 45.2 reads per million, 73 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr1: 1005437-1005497 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038361

Mature sequence bta-miR-2285bs

• Accession: MIMAT0046637
• Sequence: 40 - cuaaccuggaugaacuuuuugg - 61
• Deep sequencing: 68 reads, 40 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:26519053 "Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil" Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM BMC Genomics. 16:884(2015).