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miRBase entry: bta-mir-2285bt
Wordcloud for bta-mir-2285bt
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How is the hairpin structure generated?
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We have generated a dot-bracket structure for each sequence using RNAfold.
Unambiguous secondary structure.
Parsed and ASCII art drawn.
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Stem-loop
bta-mir-2285bt
Accession
MI0038363
Description
Bos taurus
bta-mir-2285bt precursor miRNA
Literature search
11 open access papers
mention bta-mir-2285bt
(15 sentences)
Sequence
143
reads,
2
reads per million, 56 experiments
Show Histogram
Copy Sequence
AAAAAGUUCAUUUGGGUUGUCUguaacaucuuauggaaaaaccaaacgaacuuuugg
.((((((((.(((((....(((((((....)))))))....))))).))))))))..
Structure
-A A GUUG c AAAAGUUC UUUGG UCUguaa a |||||||| ||||| ||||||| uuuucaag aaacc agguauu u gg c aaaa c
Annotation confidence
Low
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Genome context
chr21: 62129493-62129549 [-]
Database links
References
PubMed ID:
26519053
Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
BMC Genomics (2015) 16:884