Stem-loop sequence bta-mir-2285bu-1

Accession

MI0038364 (change log)

Description

Bos taurus miR-2285bu-1 stem-loop

Literature search

11 open access papers mention bta-mir-2285bu-1
(15 sentences)

Stem-loop

   --      g              g   cag 
5'   aaaaag ucguucggguuuuu uag   a
     |||||| |||||||||||||| |||    
3'   uuuuuc aguaaguccagaaa guc   u
   gg      a              g   uug 

Deep sequencing

10912 reads, 54.7 reads per million, 75 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr13: 60619752-60619811 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038364

Mature sequence bta-miR-2285bu

• Accession: MIMAT0046640
• Sequence: 39 - aagaccugaaugaacuuuuugg - 60
• Deep sequencing: 10698 reads, 74 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:26519053 "Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil" Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM BMC Genomics. 16:884(2015).