Stem-loop sequence bta-mir-2285bx

Accession

MI0038368 (change log)

Description

Bos taurus miR-2285bx stem-loop

Literature search

11 open access papers mention bta-mir-2285bx
(15 sentences)

Stem-loop

   ---        g    au       uaag 
5'    aaaaguuc uucg  uuuuccu    a
      |||||||| ||||  |||||||    u
3'    uuuucaag aagc  aaaaggg    u
   guu        g    cc       caua 

Deep sequencing

100 reads, 0 reads per million, 20 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr15: 45103398-45103455 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038368

Mature sequence bta-miR-2285bx

• Accession: MIMAT0046644
• Sequence: 1 - aaaaguucguucgauuuuuccu - 22
• Deep sequencing: 57 reads, 6 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:26519053 "Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil" Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM BMC Genomics. 16:884(2015).